Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 5728
Gene Symbol: PTEN
PTEN
0.110 CausalMutation disease CLINVAR
Entrez Id: 1282
Gene Symbol: COL4A1
COL4A1
0.100 CausalMutation disease CLINVAR
Entrez Id: 3145
Gene Symbol: HMBS
HMBS
0.100 CausalMutation disease CLINVAR
Entrez Id: 5832
Gene Symbol: ALDH18A1
ALDH18A1
0.100 CausalMutation disease CLINVAR
Entrez Id: 6532
Gene Symbol: SLC6A4
SLC6A4
0.700 AlteredExpression disease BEFREE Selective serotonin reuptake inhibitors (SSRIs), such as citalopram, which selectively block serotonin transporter (5-HTT) activity, are widely used in the treatment of depression and anxiety disorders. 25745133 2015
Entrez Id: 6532
Gene Symbol: SLC6A4
SLC6A4
0.700 AlteredExpression disease BEFREE Two independent longitudinal studies (n = 681 and 176, respectively) examined whether 5-HTTLPR moderated associations between low levels of positive parenting at 11-13 years and subsequent depression at 17-19 years. 29094757 2019
Entrez Id: 6532
Gene Symbol: SLC6A4
SLC6A4
0.700 AlteredExpression disease BEFREE Social support and the serotonin transporter genotype (5-HTTLPR) moderate levels of resilience, sense of coherence, and depression. 25989139 2015
Entrez Id: 6532
Gene Symbol: SLC6A4
SLC6A4
0.700 AlteredExpression disease BEFREE The aim of this study is to investigate the development of depression during interferon-alpha (IFN-α) therapy and the variations in the expression of the serotonin receptor (5-HTR) and transporter (5-HTT) in hepatitis C patients. 24462335 2015
Entrez Id: 6532
Gene Symbol: SLC6A4
SLC6A4
0.700 AlteredExpression disease BEFREE BDNF mediates the protective effects of scopolamine in reserpine-induced depression-like behaviors via up-regulation of 5-HTT and TPH1. 30529315 2019
Entrez Id: 6532
Gene Symbol: SLC6A4
SLC6A4
0.700 AlteredExpression disease BEFREE SSRI treatment does not further alter the elevated SLC6A4 expression levels observed with exposure to maternal depression or anxiety. 21547899 2011
Entrez Id: 6532
Gene Symbol: SLC6A4
SLC6A4
0.700 AlteredExpression disease BEFREE Our investigation suggested that the increased expression of 5HTT mRNA in peripheral leukocytes may be related with the pathophysiology of depression and its reduction after treatment may reflect the adaptive change induced by the antidepressant. 16055263 2005
Entrez Id: 6532
Gene Symbol: SLC6A4
SLC6A4
0.700 AlteredExpression disease BEFREE These observations demonstrate that IL6 directly controls SERT levels and consequently serotonin reuptake and identify STAT3-dependent regulation of SERT as conceivable neurobiological substrate for the involvement of IL6 in depression. 25760924 2015
Entrez Id: 6532
Gene Symbol: SLC6A4
SLC6A4
0.700 AlteredExpression disease BEFREE Low 5-HTT expression is, however, also a risk factor for depression where thermal insensitivity is often seen. 21423614 2011
Entrez Id: 6532
Gene Symbol: SLC6A4
SLC6A4
0.700 AlteredExpression disease BEFREE The aims of this study were (1) to investigate the association between 5HTT methylation or expression in leukocytes and depression and (2) to investigate a possible effect of 5HTT methylation, expression, and genotype on clinical symptoms in MDD. 27005686 2016
Entrez Id: 6647
Gene Symbol: SOD1
SOD1
0.620 AlteredExpression disease BEFREE Several behavior tests (sucrose preference test (SPT), forced swimming test (FST) and tail suspension test (TST)) and biochemical parameters (IL-6, TNF-α and SOD levels) were used to evaluate the antidepressive effect of PF on LPS-induced depression model. 31052597 2019
Entrez Id: 627
Gene Symbol: BDNF
BDNF
0.600 AlteredExpression disease BEFREE The factors that most strongly influenced changes in serum BDNF levels following treatment in an alcohol detoxification program were variants of the BDNF gene and ongoing depression. 28485899 2017
Entrez Id: 627
Gene Symbol: BDNF
BDNF
0.600 AlteredExpression disease BEFREE Using BDNF knockdown by RNA interference and lentiviral vectors injected into specific subregions of the hippocampus we show that a reduction in BDNF expression in the dentate gyrus, but not the CA3, reduces neurogenesis and affects behaviors associated with depression. 19621014 2010
Entrez Id: 2908
Gene Symbol: NR3C1
NR3C1
0.600 AlteredExpression disease BEFREE Effects of cytokines on glucocorticoid receptor expression and function. Glucocorticoid resistance and relevance to depression. 10442170 1999
Entrez Id: 2908
Gene Symbol: NR3C1
NR3C1
0.600 AlteredExpression disease BEFREE In addition, six glucocorticoid receptor pathway genes (Slc22a5, Aqp1, Stat5a, Ampd3, Plekhf1, and Cyb561) were upregulated in GF mice, and of these only two (Stat5a and Ampd3) were upregulated in LPS-treated mice, whereas the shared gene, Stat5a, was downregulated in "depression microbiota" recipient mice. 30194287 2018
Entrez Id: 121278
Gene Symbol: TPH2
TPH2
0.600 AlteredExpression disease BEFREE We conclude that BH<sub>4</sub> treatment of HPA toward systemic L-Phe lowering reverses elevated brain L-Phe content but the recovery of TPH2 protein and activity as well as serotonin levels is suboptimal, indicating that patients with mild HPA and mood problems (depression or anxiety) treated with the current diet may benefit from supplementation with BH<sub>4</sub> and 5-OH-tryptophan. 29520738 2018
Entrez Id: 627
Gene Symbol: BDNF
BDNF
0.600 AlteredExpression disease BEFREE The aim of this study was to investigate the effects of probiotic and synbiotic supplementation on the depression and anxiety symptoms and serum brain-derived neurotrophic factor (BDNF) level. 31379269 2019
Entrez Id: 6281
Gene Symbol: S100A10
S100A10
0.600 AlteredExpression disease BEFREE Previously, it has been found that p11 mRNA expression was significantly changed in post mortem cortex of patients with PTSD and depression. 19380152 2009
Entrez Id: 627
Gene Symbol: BDNF
BDNF
0.600 AlteredExpression disease BEFREE At the molecular level, the expression of Brain-Derived Neurotrophic Factor (BDNF), a neuropeptide associated with depression, and few other stress-specific genes CRH, NR3C1, CART, and NPY were measured in the Prefrontal Cortex (PFC) region of the reward circuitry. 28527954 2017
Entrez Id: 3569
Gene Symbol: IL6
IL6
0.600 AlteredExpression disease BEFREE Interestingly, the depression-associated module was highly enriched for pathways related to immune function and was also associated with TL and IL-6 cytokine levels. 29790996 2018
Entrez Id: 627
Gene Symbol: BDNF
BDNF
0.600 AlteredExpression disease BEFREE IFN-α therapy further lowered BDNF serum levels (F4,37.7=5.0; P=0.003), but this decrease occurred regardless of depression development. 23303061 2013